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    AL542_RS00195 sigma-54 dependent transcriptional regulator [ Grimontia hollisae ]

    Gene ID: 58894285, updated on 6-Mar-2024

    Summary

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    Gene symbol
    AL542_RS00195
    Gene description
    sigma-54 dependent transcriptional regulator
    Locus tag
    AL542_RS00195
    Gene type
    protein coding
    Organism
    Grimontia hollisae (strain: FDAARGOS_111, nat-host: Homo sapiens, culture-collection: FDA:FDAARGOS_111)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia
    Old locus tag
    AL542_00190
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    Genomic context

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    Location:
    chromosome: 2

    2 - NZ_CP014055.2Genomic Context describing neighboring genes Neighboring gene TolC family outer membrane protein Neighboring gene HlyD family type I secretion periplasmic adaptor subunit Neighboring gene ATP-binding protein Neighboring gene helix-turn-helix transcriptional regulator Neighboring gene pyridoxamine 5'-phosphate oxidase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP014055.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Signal sensing by sigma 54-dependent regulators: derepression as a control mechanism. Shingler V. Mol Microbiol, 1996 Feb. PMID 8830233

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    sigma-54 dependent transcriptional regulator

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP014055.2 Reference assembly

      Range
      43954..45261 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005504622.1 sigma-54 dependent transcriptional regulator [Grimontia hollisae]

      See identical proteins and their annotated locations for WP_005504622.1

      UniProtKB/TrEMBL
      D0I8W5
      Conserved Domains (1) summary
      COG2204
      Location:1 → 435
      AtoC; DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains [Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version

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