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    CC1G_13662 hypothetical protein [ Coprinopsis cinerea okayama7#130 ]

    Gene ID: 6013273, updated on 17-May-2024

    Summary

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    Gene symbol
    CC1G_13662
    Gene description
    hypothetical protein
    Locus tag
    CC1G_13662
    See related
    FungiDB:CC1G_13662; VEuPathDB:CC1G_13662
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Coprinopsis cinerea okayama7#130 (strain: okayama7#130)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Psathyrellaceae; Coprinopsis
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    Genomic context

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    See CC1G_13662 in Genome Data Viewer
    Location:
    chromosome: 1, map: unlocalized
    Exon count:
    4

    NW_003307544.1Genomic Context describing neighboring genes Neighboring gene recA/RAD51 family protein Neighboring gene hypothetical protein Neighboring gene vacuolar membrane protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003307544.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus). Stajich JE, et al. Proc Natl Acad Sci U S A, 2010 Jun 29. PMID 20547848, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of 90S preribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of preribosome, small subunit precursor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003307544.1 Reference assembly

      Range
      1849375..1850235 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002912084.1 → XP_002912130.1  hypothetical protein CC1G_13662 [Coprinopsis cinerea okayama7#130]

      See identical proteins and their annotated locations for XP_002912130.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      D6RJS9
      Conserved Domains (1) summary
      pfam15341
      Location:12 → 150
      SLX9; Ribosome biogenesis protein SLX9
    Nucleotide Protein
    Heading Accession and Version

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