U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LACBIDRAFT_292507 40S ribosomal protein S19 [ Laccaria bicolor S238N-H82 ]

    Gene ID: 6071657, updated on 28-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LACBIDRAFT_292507
    Gene description
    40S ribosomal protein S19
    Locus tag
    LACBIDRAFT_292507
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Laccaria bicolor S238N-H82 (strain: S238N-H82)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Agaricineae; Hydnangiaceae; Laccaria
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LACBIDRAFT_292507 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_001889874.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene peroxiredoxin Q

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_001889874.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis. Martin F, et al. Nature, 2008 Mar 6. PMID 18322534
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ribosomal small subunit assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    40S ribosomal protein S19

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001889874.1 Reference assembly

      Range
      1933565..1934351
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001875745.1 → XP_001875780.1  40S ribosomal protein S19 [Laccaria bicolor S238N-H82]

      See identical proteins and their annotated locations for XP_001875780.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B0CV79
      Conserved Domains (1) summary
      pfam01090
      Location:4 → 136
      Ribosomal_S19e; Ribosomal protein S19e
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials