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    HQN82_RS08645 LysR family transcriptional regulator VtlR [ Agrobacterium pusense ]

    Gene ID: 61455393, updated on 6-Jun-2024

    Summary

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    Gene symbol
    HQN82_RS08645
    Gene description
    LysR family transcriptional regulator VtlR
    Locus tag
    HQN82_RS08645
    Gene type
    protein coding
    Organism
    Agrobacterium pusense (strain: 76, nat-host: Fusarium oxysporum f. sp. cucumerinum)
    Lineage
    Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium
    Also known as
    lsrB
    Old locus tag
    HQN82_08645
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    Genomic context

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    Location:
    chromosome: R76C1

    R76C1 - NZ_CP053856.1Genomic Context describing neighboring genes Neighboring gene Lrp/AsnC family transcriptional regulator Neighboring gene thioredoxin-disulfide reductase Neighboring gene metalloregulator ArsR/SmtB family transcription factor Neighboring gene alkene reductase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP053856.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The LysR-type transcription factor LsrB regulates beta-lactam resistance in Agrobacterium tumefaciens. Schmidt JJ, et al. Mol Microbiol, 2024 Jan. PMID 37985428
    2. A central role for the transcriptional regulator VtlR in small RNA-mediated gene regulation in Agrobacterium tumefaciens. Budnick JA, et al. Sci Rep, 2020 Sep 11. PMID 32917931, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    LysR family transcriptional regulator VtlR

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP053856.1 Reference assembly

      Range
      1760986..1761882
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_034498849.1 MULTISPECIES: LysR family transcriptional regulator VtlR [Rhizobium/Agrobacterium group]

      See identical proteins and their annotated locations for WP_034498849.1

      UniProtKB/TrEMBL
      A0A125RT56, A0A1L9CEX5, A0A349XSW7, A0A4S1HEL2
      Conserved Domains (1) summary
      COG0583
      Location:3 → 294
      LysR; DNA-binding transcriptional regulator, LysR family [Transcription]
    Nucleotide Protein
    Heading Accession and Version

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