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    HQN82_RS09375 L,D-transpeptidase [ Agrobacterium pusense ]

    Gene ID: 61455539, updated on 13-May-2024

    Summary

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    Gene symbol
    HQN82_RS09375
    Gene description
    L,D-transpeptidase
    Locus tag
    HQN82_RS09375
    Gene type
    protein coding
    Organism
    Agrobacterium pusense (strain: 76, nat-host: Fusarium oxysporum f. sp. cucumerinum)
    Lineage
    Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium
    Old locus tag
    HQN82_09375
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    Genomic context

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    Location:
    chromosome: R76C1

    R76C1 - NZ_CP053856.1Genomic Context describing neighboring genes Neighboring gene EamA family transporter Neighboring gene DoxX family protein Neighboring gene DMT family transporter Neighboring gene circularly permuted type 2 ATP-grasp protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP053856.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete Genome Sequence of the Sesbania Symbiont and Rice Growth-Promoting Endophyte Rhizobium sp. Strain IRBG74. Crook MB, et al. Genome Announc, 2013 Nov 21. PMID 24265489, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    L,D-transpeptidase
    WP_004443131.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP053856.1 Reference assembly

      Range
      1914028..1914645 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_004443131.1 MULTISPECIES: L,D-transpeptidase [Rhizobium/Agrobacterium group]

      See identical proteins and their annotated locations for WP_004443131.1

      UniProtKB/TrEMBL
      A0A1L9CRP4, A0A349XNR6, A0A4S1HG48, A0A9W5F264, A0A9X0TP92, U4PZP3
      Conserved Domains (1) summary
      COG1376
      Location:16 → 204
      ErfK; Lipoprotein-anchoring transpeptidase ErfK/SrfK [Cell wall/membrane/envelope biogenesis]
    Nucleotide Protein
    Heading Accession and Version