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    J0X03_RS02415 PRD domain-containing protein [ Serratia ureilytica ]

    Gene ID: 64306395, updated on 3-Dec-2024

    Summary

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    Gene symbol
    J0X03_RS02415
    Gene description
    PRD domain-containing protein
    Locus tag
    J0X03_RS02415
    Gene type
    protein coding
    Organism
    Serratia ureilytica (strain: T6, nat-host: soil)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Serratia
    Old locus tag
    J0X03_02415
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    Genomic context

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    NZ_CP071320.1Genomic Context describing neighboring genes Neighboring gene DgaE family pyridoxal phosphate-dependent ammonia lyase Neighboring gene KDGP aldolase family protein Neighboring gene lactonase family protein Neighboring gene helix-turn-helix domain-containing protein Neighboring gene type II toxin-antitoxin system HigB family toxin Neighboring gene PTS phosphocarrier protein NPr Neighboring gene RNase adapter RapZ

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP071320.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structural insights into the regulation of bacterial signalling proteins containing PRDs. van Tilbeurgh H, et al. Curr Opin Struct Biol, 2001 Dec. PMID 11751049
    2. Dimer stabilization upon activation of the transcriptional antiterminator LicT. Declerck N, et al. J Mol Biol, 2001 Dec 7. PMID 11733988
    3. Crystal structure of an activated form of the PTS regulation domain from the LicT transcriptional antiterminator. van Tilbeurgh H, et al. EMBO J, 2001 Jul 16. PMID 11447120, Free PMC Article
    4. Activation of the LicT transcriptional antiterminator involves a domain swing/lock mechanism provoking massive structural changes. Graille M, et al. J Biol Chem, 2005 Apr 15. PMID 15699035

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    PRD domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP071320.1 Reference assembly

      Range
      523153..525069
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_033644486.1 MULTISPECIES: PRD domain-containing protein [Serratia]

      See identical proteins and their annotated locations for WP_033644486.1

      UniProtKB/TrEMBL
      A0A8B4GGG1, A0AAP8PWK6, A0AAV3LNA2
      Conserved Domains (2) summary
      COG3711
      Location:11 → 482
      BglG; Transcriptional antiterminator [Transcription]
      cl00163
      Location:511 → 634
      PTS_IIA_fru; PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This ...
    Nucleotide Protein
    Heading Accession and Version