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    ndl serine protease nudel [ Drosophila yakuba ]

    Gene ID: 6533215, updated on 13-May-2024

    Summary

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    Gene symbol
    ndl
    Gene description
    serine protease nudel
    Locus tag
    Dyak_GE20478
    See related
    EnsemblRapid:LOC6533215
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila yakuba
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GE20478; GE20478-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See ndl in Genome Data Viewer
    Location:
    chromosome: 3L
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    102 current Prin_Dyak_Tai18E2_2.1 (GCF_016746365.2) 3L NC_052529.2 (7221454..7232766, complement)
    101 previous assembly Prin_Dyak_Tai18E2_2.0 (GCF_016746365.1) 3L NC_052529.1 (7221476..7232778, complement)

    Chromosome 3L - NC_052529.2Genomic Context describing neighboring genes Neighboring gene N-deacetylase and N-sulfotransferase sfl Neighboring gene beta-Tubulin at 65B Neighboring gene mitochondrial calcium uniporter Neighboring gene protein javelin Neighboring gene RNA exonuclease 5 Neighboring gene zero population growth Neighboring gene BTB/POZ domain-containing protein axundead

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine protease nudel
    Names
    Dyak\GE20478
    Dyak\GE20478-PA
    dyak_GLEANR_4317

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila yakuba Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

    Genomic

    1. NC_052529.2 Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

      Range
      7221454..7232766 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039374495.2 → XP_039230429.1  serine protease nudel

      UniProtKB/TrEMBL
      B4PJQ4
      Related
      XP_039230429.1, XM_039374495.2
      Conserved Domains (6) summary
      PHA03255
      Location:1476 → 1611
      PHA03255; BDLF3; Provisional
      smart00192
      Location:2340 → 2373
      LDLa; Low-density lipoprotein receptor domain class A
      COG0419
      Location:72 → 223
      SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
      cd00112
      Location:2411 → 2447
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      cd00190
      Location:1140 → 1374
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
      pfam09342
      Location:2031 → 2148
      DUF1986; Domain of unknown function (DUF1986)

    2. XM_002093905.4 → XP_002093941.1  serine protease nudel

      See identical proteins and their annotated locations for XP_002093941.1

      UniProtKB/TrEMBL
      B4PJQ4
      Related
      XP_002093941.1, XM_002093905.4
      Conserved Domains (6) summary
      PHA03255
      Location:1476 → 1611
      PHA03255; BDLF3; Provisional
      smart00192
      Location:2340 → 2373
      LDLa; Low-density lipoprotein receptor domain class A
      COG0419
      Location:72 → 223
      SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
      cd00112
      Location:2411 → 2447
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      cd00190
      Location:1140 → 1374
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
      pfam09342
      Location:2031 → 2148
      DUF1986; Domain of unknown function (DUF1986)
    Nucleotide Protein Strain
    Heading Accession and Version

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