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    LOC6600094 protein SPT2 homolog [ Drosophila persimilis ]

    Gene ID: 6600094, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6600094
    Gene description
    protein SPT2 homolog
    Locus tag
    Dper_GL13361
    See related
    EnsemblRapid:LOC6600094
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila persimilis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GL13361; GL13361-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6600094 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    101 current DperRS2 (GCF_003286085.1) Unplaced Scaffold NW_020825326.1 (519717..522375)

    NW_020825326.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6600098 Neighboring gene uncharacterized LOC113566207 Neighboring gene glutathione hydrolase 1 proenzyme Neighboring gene breakpoint cluster region protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020825326 Unplaced Scaffold Reference DperRS2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nucleosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein SPT2 homolog
    Names
    Dper\GL13361
    Dper\GL13361-PA
    dper_GLEANR_13762

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila persimilis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DperRS2

    Genomic

    1. NW_020825326.1 Reference DperRS2

      Range
      519717..522375
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002025171.2 → XP_002025207.1  protein SPT2 homolog

      See identical proteins and their annotated locations for XP_002025207.1

      UniProtKB/TrEMBL
      B4H313
      Related
      XP_002025207.1, XM_002025171.2
      Conserved Domains (1) summary
      pfam08243
      Location:516 → 592
      SPT2; SPT2 chromatin protein
    Nucleotide Protein
    Heading Accession and Version

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