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    KNZ77_RS10710 glycoside hydrolase family 13 protein [ Clostridioides difficile ]

    Gene ID: 66354580, updated on 17-Dec-2024

    Summary

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    Gene symbol
    KNZ77_RS10710
    Gene description
    glycoside hydrolase family 13 protein
    Locus tag
    KNZ77_RS10710
    Gene type
    protein coding
    Organism
    Clostridioides difficile (strain: S-0253, nat-host: Homo sapiens)
    Lineage
    Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Clostridioides
    Old locus tag
    KNZ77_10710
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    Genomic context

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    NZ_CP076401.1Genomic Context describing neighboring genes Neighboring gene glycoside hydrolase family 73 protein Neighboring gene glycoside hydrolase family 65 protein Neighboring gene beta-phosphoglucomutase Neighboring gene histidinol-phosphatase HisJ family protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP076401.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of the sequence motif of glycoside hydrolase 13 family members. Kumar V. Bioinformation, 2011 Mar 26. PMID 21544166, Free PMC Article
    2. Dividing the large glycoside hydrolase family 13 into subfamilies: towards improved functional annotations of alpha-amylase-related proteins. Stam MR, et al. Protein Eng Des Sel, 2006 Dec. PMID 17085431
    3. Relationship of sequence and structure to specificity in the alpha-amylase family of enzymes. MacGregor EA, et al. Biochim Biophys Acta, 2001 Mar 9. PMID 11257505

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    glycoside hydrolase family 13 protein
    WP_009897348.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP076401.1 Reference assembly

      Range
      2327698..2329581 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_009897348.1 glycoside hydrolase family 13 protein [Clostridioides difficile]

      UniProtKB/TrEMBL
      A0A381IBR4, A0A9Q7ZU57, Q185X6
      Conserved Domains (2) summary
      cd11338
      Location:175 → 555
      AmyAc_CMD; Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins
      pfam02903
      Location:25 → 162
      Alpha-amylase_N; Alpha amylase, N-terminal ig-like domain
    Nucleotide Protein
    Heading Accession and Version

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