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    E5165_RS08660 polysaccharide biosynthesis/export family protein [ Flavobacterium psychrophilum ]

    Gene ID: 66553180, updated on 31-Mar-2024

    Summary

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    Gene symbol
    E5165_RS08660
    Gene description
    polysaccharide biosynthesis/export family protein
    Locus tag
    E5165_RS08660
    Gene type
    protein coding
    Organism
    Flavobacterium psychrophilum (strain: 160401-1/5N, nat-host: rainbow trout)
    Lineage
    Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium
    Old locus tag
    E5165_10505
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    Genomic context

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    NZ_CP039120.2Genomic Context describing neighboring genes Neighboring gene CpsB/CapC family capsule biosynthesis tyrosine phosphatase Neighboring gene tyrosine-protein kinase Neighboring gene nucleoside-diphosphate sugar epimerase/dehydratase Neighboring gene DegT/DnrJ/EryC1/StrS family aminotransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP039120.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bacteriophage resistance mechanisms in the fish pathogen Flavobacterium psychrophilum: linking genomic mutations to changes in bacterial virulence factors. Castillo D, et al. Appl Environ Microbiol, 2015 Feb. PMID 25480749, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    polysaccharide biosynthesis/export family protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP039120.2 Reference assembly

      Range
      1942774..1943571 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011963408.1 polysaccharide biosynthesis/export family protein [Flavobacterium psychrophilum]

      See identical proteins and their annotated locations for WP_011963408.1

      UniProtKB/TrEMBL
      A0A076P5V7, A6GZ36
      Conserved Domains (2) summary
      COG1596
      Location:97 → 237
      Wza; Periplasmic protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold [Cell wall/membrane/envelope biogenesis]
      pfam02563
      Location:49 → 140
      Poly_export; Polysaccharide biosynthesis/export protein
    Nucleotide Protein
    Heading Accession and Version

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