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    AMM49_RS03870 terminase TerL endonuclease subunit [ Streptococcus agalactiae ]

    Gene ID: 66885656, updated on 3-Dec-2024

    Summary

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    Gene symbol
    AMM49_RS03870
    Gene description
    terminase TerL endonuclease subunit
    Locus tag
    AMM49_RS03870
    Gene type
    protein coding
    Organism
    Streptococcus agalactiae (strain: NGBS128, nat-host: Homo sapiens)
    Lineage
    Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus
    Old locus tag
    AMM49_03860
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    Genomic context

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    NZ_CP012480.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene DUF4314 domain-containing protein Neighboring gene phage terminase small subunit P27 family Neighboring gene hypothetical protein Neighboring gene type II toxin-antitoxin system RelE/ParE family toxin Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP012480.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure and mechanism of the ATPase that powers viral genome packaging. Hilbert BJ, et al. Proc Natl Acad Sci U S A, 2015 Jul 21. PMID 26150523, Free PMC Article
    2. Viral genome packaging terminase cleaves DNA using the canonical RuvC-like two-metal catalysis mechanism. Xu RG, et al. Nucleic Acids Res, 2017 Apr 7. PMID 28100693, Free PMC Article
    3. 2015 Epidemic of Severe Streptococcus agalactiae Sequence Type 283 Infections in Singapore Associated With the Consumption of Raw Freshwater Fish: A Detailed Analysis of Clinical, Epidemiological, and Bacterial Sequencing Data. Kalimuddin S, et al. Clin Infect Dis, 2017 May 15. PMID 28475781

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    terminase TerL endonuclease subunit

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP012480.1 Reference assembly

      Range
      725565..727157
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_017646683.1 MULTISPECIES: terminase TerL endonuclease subunit [Streptococcus]

      See identical proteins and their annotated locations for WP_017646683.1

      UniProtKB/TrEMBL
      A0A413KNM6, A0AAW3HTT2, W1TYK9
      Conserved Domains (1) summary
      COG4626
      Location:18 → 527
      YmfN; Phage terminase-like protein, large subunit, contains N-terminal HTH domain [Mobilome: prophages, transposons]
    Nucleotide Protein
    Heading Accession and Version