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    ALTATR162_LOCUS6144 uncharacterized protein [ Alternaria atra ]

    Gene ID: 67018001, updated on 30-Nov-2023

    Summary

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    Gene symbol
    ALTATR162_LOCUS6144
    Gene description
    uncharacterized protein
    Locus tag
    ALTATR162_LOCUS6144
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Alternaria atra (isolate: CS162)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Alternaria; Alternaria sect. Ulocladioides
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    Genomic context

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    See ALTATR162_LOCUS6144 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_025091323.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_025091323.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in macroautophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in fungal-type vacuole membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    XP_043169700.1
    • ID:g9302.t1.CDS1;
      ID:g9302.t1.CDS2;
      ID:g9302.t1.CDS3;
      source:AUGUSTUS

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_025091323.1 Reference assembly

      Range
      3251117..3252510 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043313765.1 → XP_043169700.1  uncharacterized protein ALTATR162_LOCUS6144 [Alternaria atra]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8J2I6D8
      Conserved Domains (2) summary
      smart00554
      Location:224 → 319
      FAS1; Four repeated domains in the Fasciclin I family of proteins, present in many other contexts
      cl02663
      Location:27 → 177
      Fasciclin; Fasciclin domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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