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    LOC6738824 tectonin beta-propeller repeat-containing protein [ Drosophila simulans ]

    Gene ID: 6738824, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6738824
    Gene description
    tectonin beta-propeller repeat-containing protein
    Locus tag
    Dsimw501_GD12202
    See related
    EnsemblRapid:LOC6738824
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila simulans
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GD12202; GD12202-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6738824 in Genome Data Viewer
    Location:
    chromosome: 3L
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Prin_Dsim_3.1 (GCF_016746395.2) 3L NC_052522.2 (19968277..19973260, complement)
    102 previous assembly Prin_Dsim_3.0 (GCF_016746395.1) 3L NC_052522.1 (19968423..19973273, complement)

    Chromosome 3L - NC_052522.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6738821 Neighboring gene cilia- and flagella-associated protein 157 Neighboring gene FSHD region gene 1 Neighboring gene DCN1-like protein SCCRO4 Neighboring gene lysosome-associated membrane glycoprotein 5 Neighboring gene Serine/threonine-protein kinase polo

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tectonin beta-propeller repeat-containing protein
    Names
    Dsim\GD12202
    Dsim\GD12202-PA
    dsim_GLEANR_12272

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila simulans Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Prin_Dsim_3.1

    Genomic

    1. NC_052522.2 Reference Prin_Dsim_3.1

      Range
      19968277..19973260 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002085588.4 → XP_002085624.1  tectonin beta-propeller repeat-containing protein

      See identical proteins and their annotated locations for XP_002085624.1

      UniProtKB/TrEMBL
      B4QRW3
      Related
      XP_002085624.1, XM_002085588.4
      Conserved Domains (6) summary
      smart00694
      Location:1092 → 1125
      DysFC; Dysferlin domain, C-terminal region
      smart00693
      Location:64 → 125
      DysFN; Dysferlin domain, N-terminal region
      smart00706
      Location:966 → 1000
      TECPR; Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins
      pfam00337
      Location:815 → 954
      Gal-bind_lectin; Galactoside-binding lectin
      pfam06462
      Location:1209 → 1237
      Hyd_WA; Propeller
      cl17171
      Location:639 → 767
      PH-like; Pleckstrin homology-like domain
    Nucleotide Protein Strain
    Heading Accession and Version

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