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    Fam32a family with sequence similarity 32, member A [ Mus musculus (house mouse) ]

    Gene ID: 67922, updated on 27-Nov-2024

    Summary

    Official Symbol
    Fam32aprovided by MGI
    Official Full Name
    family with sequence similarity 32, member Aprovided by MGI
    Primary source
    MGI:MGI:1915172
    See related
    Ensembl:ENSMUSG00000003039 AllianceGenome:MGI:1915172
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Otag12; OTAG-12; 2510049I19Rik
    Summary
    Predicted to be involved in apoptotic process. Predicted to be located in nucleoplasm. Predicted to be active in nucleolus. Orthologous to human FAM32A (family with sequence similarity 32 member A). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 38.9), CNS E14 (RPKM 36.4) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Fam32a in Genome Data Viewer
    Location:
    8 B3.3; 8 34.9 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (72973589..72978878)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (72219745..72225034)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene hematopoietic SH2 domain containing Neighboring gene calcium and integrin binding family member 3 Neighboring gene STARR-positive B cell enhancer ABC_E9026 Neighboring gene STARR-positive B cell enhancer ABC_E2266 Neighboring gene predicted gene, 51536 Neighboring gene adaptor-related protein complex AP-1, mu subunit 1 Neighboring gene STARR-positive B cell enhancer ABC_E5019 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:74802980-74803318 Neighboring gene predicted gene, 51537

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    protein FAM32A
    Names
    ovarian tumor associated gene-12

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026455.5NP_080731.1  protein FAM32A

      See identical proteins and their annotated locations for NP_080731.1

      Status: VALIDATED

      Source sequence(s)
      AC158898
      Consensus CDS
      CCDS52595.1
      UniProtKB/Swiss-Prot
      Q8K5E4, Q9CR80
      Related
      ENSMUSP00000003123.9, ENSMUST00000003123.10

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      72973589..72978878
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)