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    CMU_023620 valyl-tRNA synthetase, putative [ Cryptosporidium muris RN66 ]

    Gene ID: 6994849, updated on 17-May-2024

    Summary

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    Gene symbol
    CMU_023620
    Gene description
    valyl-tRNA synthetase, putative
    Locus tag
    CMU_023620
    See related
    CryptoDB:CMU_023620; VEuPathDB:CMU_023620
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Cryptosporidium muris RN66 (strain: RN66)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Cryptosporidiidae; Cryptosporidium
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    Genomic context

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    See CMU_023620 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_002196571.1Genomic Context describing neighboring genes Neighboring gene helicase SWR1 protein, putative Neighboring gene proteasome activator pa28 beta subunit family protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_002196571.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables aminoacyl-tRNA editing activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables valine-tRNA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in valyl-tRNA aminoacylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    valyl-tRNA synthetase, putative
    XP_002139706.1
    • encoded by transcript CMU_023620A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_002196571.1 Reference assembly

      Range
      245553..248773
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002139670.1 → XP_002139706.1  valyl-tRNA synthetase, putative [Cryptosporidium muris RN66]

      See identical proteins and their annotated locations for XP_002139706.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B6AC04
      Conserved Domains (4) summary
      cd07962
      Location:693 → 843
      Anticodon_Ia_Val; Anticodon-binding domain of valyl tRNA synthetases
      cd00817
      Location:60 → 693
      ValRS_core; catalytic core domain of valyl-tRNA synthetases
      PTZ00419
      Location:1 → 1045
      PTZ00419; valyl-tRNA synthetase-like protein; Provisional
      pfam13603
      Location:268 → 373
      tRNA-synt_1_2; Leucyl-tRNA synthetase, Domain 2
    Nucleotide Protein
    Heading Accession and Version

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