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    rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ [ Vibrio splendidus ]

    Gene ID: 72399354, updated on 13-May-2024

    Summary

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    Gene symbol
    rlmJ
    Gene description
    23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ
    Locus tag
    LTQ54_RS17050
    Gene type
    protein coding
    Organism
    Vibrio splendidus (strain: 2_C04b, nat-host: Magallana gigas)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
    Old locus tag
    LTQ54_17050
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    Genomic context

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    Location:
    chromosome: 2

    2 - NZ_CP089204.1Genomic Context describing neighboring genes Neighboring gene protein translocase subunit SecD Neighboring gene protein translocase subunit SecF Neighboring gene HNH endonuclease signature motif containing protein Neighboring gene alkene reductase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP089204.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The last rRNA methyltransferase of E. coli revealed: the yhiR gene encodes adenine-N6 methyltransferase specific for modification of A2030 of 23S ribosomal RNA. Golovina AY, et al. RNA, 2012 Sep. PMID 22847818, Free PMC Article
    2. Structural and functional insights into the molecular mechanism of rRNA m6A methyltransferase RlmJ. Punekar AS, et al. Nucleic Acids Res, 2013 Nov. PMID 23945937, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP089204.1 Reference assembly

      Range
      215852..216718
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_102447494.1 MULTISPECIES: 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ [Vibrio]

      UniProtKB/TrEMBL
      A0A2N7CBH4
      Conserved Domains (1) summary
      COG2961
      Location:1 → 288
      RlmJ; 23S rRNA A2030 N6-methylase RlmJ [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version