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    LRK52_RS04075 ABC transporter permease [ Rhodanobacter denitrificans ]

    Gene ID: 72425796, updated on 13-May-2024

    Summary

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    Gene symbol
    LRK52_RS04075
    Gene description
    ABC transporter permease
    Locus tag
    LRK52_RS04075
    Gene type
    protein coding
    Organism
    Rhodanobacter denitrificans (strain: FW104-R5)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Rhodanobacteraceae; Rhodanobacter
    Old locus tag
    LRK52_04075
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    Genomic context

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    NZ_CP088980.1Genomic Context describing neighboring genes Neighboring gene ABC transporter permease Neighboring gene ABC transporter permease Neighboring gene FtsX-like permease family protein Neighboring gene ABC transporter permease

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP088980.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Crystal structure of the periplasmic region of MacB, a noncanonic ABC transporter. Xu Y, et al. Biochemistry, 2009 Jun 16. PMID 19432486
    2. Genomic Features and Pervasive Negative Selection in Rhodanobacter Strains Isolated from Nitrate and Heavy Metal Contaminated Aquifer. Peng M, et al. Microbiol Spectr, 2022 Feb 23. PMID 35107332, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    ABC transporter permease

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP088980.1 Reference assembly

      Range
      917294..918601
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_007507121.1 MULTISPECIES: ABC transporter permease [Rhodanobacter]

      See identical proteins and their annotated locations for WP_007507121.1

      Conserved Domains (2) summary
      pfam02687
      Location:313 → 361
      FtsX; FtsX-like permease family
      pfam12704
      Location:9 → 223
      MacB_PCD; MacB-like periplasmic core domain
    Nucleotide Protein
    Heading Accession and Version