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    LRK52_RS04555 AbrB/MazE/SpoVT family DNA-binding domain-containing protein [ Rhodanobacter denitrificans ]

    Gene ID: 72425892, updated on 13-May-2024

    Summary

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    Gene symbol
    LRK52_RS04555
    Gene description
    AbrB/MazE/SpoVT family DNA-binding domain-containing protein
    Locus tag
    LRK52_RS04555
    Gene type
    protein coding
    Organism
    Rhodanobacter denitrificans (strain: FW104-R5)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Rhodanobacteraceae; Rhodanobacter
    Old locus tag
    LRK52_04555
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    Genomic context

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    NZ_CP088980.1Genomic Context describing neighboring genes Neighboring gene type II secretion system F family protein Neighboring gene type IV-A pilus assembly ATPase PilB Neighboring gene type II toxin-antitoxin system VapC family toxin Neighboring gene glycosyltransferase family 2 protein Neighboring gene glycosyltransferase family 4 protein Neighboring gene hypothetical protein Neighboring gene glycosyltransferase family 2 protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP088980.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic Features and Pervasive Negative Selection in Rhodanobacter Strains Isolated from Nitrate and Heavy Metal Contaminated Aquifer. Peng M, et al. Microbiol Spectr, 2022 Feb 23. PMID 35107332, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    AbrB/MazE/SpoVT family DNA-binding domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP088980.1 Reference assembly

      Range
      1022179..1022421
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_007513924.1 MULTISPECIES: AbrB/MazE/SpoVT family DNA-binding domain-containing protein [Rhodanobacter]

      See identical proteins and their annotated locations for WP_007513924.1

      UniProtKB/TrEMBL
      A0A154QKH7
      Conserved Domains (1) summary
      COG2002
      Location:1 → 52
      AbrB; Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module [Transcription, Defense mechanisms]
    Nucleotide Protein
    Heading Accession and Version