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    LRK52_RS16555 YbaY family lipoprotein [ Rhodanobacter denitrificans ]

    Gene ID: 72428292, updated on 13-May-2024

    Summary

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    Gene symbol
    LRK52_RS16555
    Gene description
    YbaY family lipoprotein
    Locus tag
    LRK52_RS16555
    Gene type
    protein coding
    Organism
    Rhodanobacter denitrificans (strain: FW104-R5)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Rhodanobacteraceae; Rhodanobacter
    Old locus tag
    LRK52_16555
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    Genomic context

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    NZ_CP088980.1Genomic Context describing neighboring genes Neighboring gene Tex family protein Neighboring gene autotransporter domain-containing protein Neighboring gene phosphoribosylamine--glycine ligase Neighboring gene AMP-binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP088980.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic Features and Pervasive Negative Selection in Rhodanobacter Strains Isolated from Nitrate and Heavy Metal Contaminated Aquifer. Peng M, et al. Microbiol Spectr, 2022 Feb 23. PMID 35107332, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    YbaY family lipoprotein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP088980.1 Reference assembly

      Range
      3589378..3590259 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_015449005.1 MULTISPECIES: YbaY family lipoprotein [Rhodanobacter]

      See identical proteins and their annotated locations for WP_015449005.1

      UniProtKB/TrEMBL
      M4NTD0
      Conserved Domains (2) summary
      pfam07356
      Location:208 → 286
      DUF1481; Protein of unknown function (DUF1481)
      pfam09619
      Location:50 → 144
      YscW; Type III secretion system lipoprotein chaperone (YscW)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases