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    ALIPUT_RS06405 tyrosine-type recombinase/integrase [ Alistipes putredinis DSM 17216 ]

    Gene ID: 73803253, updated on 31-Jan-2024

    Summary

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    Gene symbol
    ALIPUT_RS06405
    Gene description
    tyrosine-type recombinase/integrase
    Locus tag
    ALIPUT_RS06405
    Gene type
    protein coding
    Organism
    Alistipes putredinis DSM 17216 (strain: DSM 17216, nat-host: Homo sapiens, type-material: type strain of Bacteroides putredinis)
    Lineage
    Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes
    Old locus tag
    ALIPUT_00142
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    Genomic context

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    NZ_DS499579.1Genomic Context describing neighboring genes Neighboring gene helix-turn-helix domain-containing protein Neighboring gene DUF6043 family protein Neighboring gene site-specific integrase Neighboring gene zinc ribbon domain-containing protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_DS499579.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Flexibility in DNA recombination: structure of the lambda integrase catalytic core. Kwon HJ, et al. Science, 1997 Apr 4. PMID 9082984, Free PMC Article
    2. Structure of Cre recombinase complexed with DNA in a site-specific recombination synapse. Guo F, et al. Nature, 1997 Sep 4. PMID 9288963

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    tyrosine-type recombinase/integrase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_DS499579.1 Reference assembly

      Range
      112051..113382 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_004328968.1 MULTISPECIES: tyrosine-type recombinase/integrase [Bacteroidales]

      See identical proteins and their annotated locations for WP_004328968.1

      UniProtKB/TrEMBL
      A0A1Y4IWP2, A0A3A5RYB0, A0A6I0SUI6, A0AA43W076, B0MTN4
      Conserved Domains (1) summary
      cd01185
      Location:256 → 435
      INTN1_C_like; Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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