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    yiaO 2,3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO [ Shigella boydii ]

    Gene ID: 75204653, updated on 3-Dec-2024

    Summary

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    Gene symbol
    yiaO
    Gene description
    2,3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO
    Locus tag
    CEH00_RS14695
    Gene type
    protein coding
    Organism
    Shigella boydii (strain: ESBL-W3-2, nat-host: Homo sapiens)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
    Old locus tag
    CEH00_14735
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    Genomic context

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    NZ_NIYS01000093.1Genomic Context describing neighboring genes Neighboring gene L-ribulose-5-phosphate 3-epimerase Neighboring gene L-ribulose-5-phosphate 4-epimerase Neighboring gene 3-keto-L-gulonate-6-phosphate decarboxylase UlaD Neighboring gene L-xylulokinase Neighboring gene 2,3-diketo-L-gulonate TRAP transporter large permease YiaN Neighboring gene 2,3-diketo-L-gulonate TRAP transporter small permease YiaM

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_NIYS01000093.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel ligands for the extracellular solute receptors of two bacterial TRAP transporters. Thomas GH, et al. Microbiology (Reading), 2006 Jan. PMID 16385129
    2. Functional characterization of the Escherichia coli K-12 yiaMNO transport protein genes. Plantinga TH, et al. Mol Membr Biol, 2004 Jan-Feb. PMID 14668138

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    2,3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_NIYS01000093.1 Reference assembly

      Range
      15097..16083 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_000776894.1 MULTISPECIES: 2,3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO [Enterobacteriaceae]

      See identical proteins and their annotated locations for WP_000776894.1

      UniProtKB/TrEMBL
      A0A2A2XMR4, A0A6H2GL57, A0A979H424, A0A9Q5U918, A0AAN3M7M2, A0AAP9SJ82, A7ZTC6, J7QAG6
      Conserved Domains (1) summary
      cd13679
      Location:27 → 324
      PBP2_TRAP_YiaO_like; Substrate-binding domain of 2,3-diketo-L-gulonate-binding Tripartite ATP-independent Periplasmic transport system and related proteins; the type 2 periplasmic-binding protein fold
    Nucleotide Protein
    Heading Accession and Version