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    rimO 30S ribosomal protein S12 methylthiotransferase RimO [ Shigella boydii ]

    Gene ID: 75204700, updated on 3-Dec-2024

    Summary

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    Gene symbol
    rimO
    Gene description
    30S ribosomal protein S12 methylthiotransferase RimO
    Locus tag
    CEH00_RS14955
    Gene type
    protein coding
    Organism
    Shigella boydii (strain: ESBL-W3-2, nat-host: Homo sapiens)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
    Old locus tag
    CEH00_14990
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    Genomic context

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    NZ_NIYS01000096.1Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase GstB Neighboring gene aldose sugar dehydrogenase YliI Neighboring gene biofilm formation regulator BssR Neighboring gene GGDEF domain-containing protein Neighboring gene EAL domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_NIYS01000096.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Post-translational modification of ribosomal proteins: structural and functional characterization of RimO from Thermotoga maritima, a radical S-adenosylmethionine methylthiotransferase. Arragain S, et al. J Biol Chem, 2010 Feb 19. PMID 20007320, Free PMC Article
    2. Characterization of RimO, a new member of the methylthiotransferase subclass of the radical SAM superfamily. Lee KH, et al. Biochemistry, 2009 Oct 27. PMID 19736993, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    30S ribosomal protein S12 methylthiotransferase RimO
    WP_000049367.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_NIYS01000096.1 Reference assembly

      Range
      21896..23221
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_000049367.1 MULTISPECIES: 30S ribosomal protein S12 methylthiotransferase RimO [Enterobacteriaceae]

      See identical proteins and their annotated locations for WP_000049367.1

      UniProtKB/Swiss-Prot
      A7ZJQ2, A7ZY97, B1IXD2, B1LMD0, B1X7X6, B5YSC6, B6I8F5, B7LCB8, B7M7B0, B7NAI1, B7NNR8, P0AEI4, P0AEI5, P75802, Q323V7
      UniProtKB/TrEMBL
      A0A0E0Y399, A0A0H3PY22, A0A140NDJ4, A0A192CKH6, A0A1Q8MSY8, A0A1X3I8H8, A0A1X3J499, A0A1X3JJG7, A0A200MXA2, A0A3R0JKE9, A0A3T2V1F4, A0A4P8C5P9, A0A6H2GH63, A0A6N3QQV5, A0A6N3R619, A0A7U9J218, A0A7U9M0P1, A0A7W4KMN5, A0A7Z8BSE4, A0A828UCS6, A0A836NDW6, A0A8E0FT33, A0A9P2IC16, A0A9P2R3D0, A0A9Q6Y207, A0AA35F6E2, A0AA36KVP5, A0AAD2UAR5, A0AAD2V8R5, A0AAD2ZCJ4, A0AAN1AJW8, A0AAN1S352, A0AAN3SH86, A0AAN3UYT4, A0AAN4SZ54, A0AAP9MNS9, A0AAV3HD66, A0AAV3I9L6, B7UM30, C3THB7, D3GZQ5, E0J5V5, F4SVJ1, I6E101, W1EW22, W1X1N1
      Conserved Domains (1) summary
      PRK14862
      Location:1 → 441
      rimO; 30S ribosomal protein S12 methylthiotransferase RimO
    Nucleotide Protein
    Heading Accession and Version

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