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    C7M33_RS02475 EAL domain-containing protein [ Lactiplantibacillus plantarum ]

    Gene ID: 77215935, updated on 3-Dec-2024

    Summary

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    Gene symbol
    C7M33_RS02475
    Gene description
    EAL domain-containing protein
    Locus tag
    C7M33_RS02475
    Gene type
    protein coding
    Organism
    Lactiplantibacillus plantarum (strain: SRCM100442)
    Lineage
    Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactiplantibacillus
    Old locus tag
    C7M33_00497
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    Genomic context

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    NZ_CP028221.1Genomic Context describing neighboring genes Neighboring gene NCS2 family permease Neighboring gene NmrA family NAD(P)-binding protein Neighboring gene hypothetical protein Neighboring gene glycosyltransferase Neighboring gene methionine synthase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP028221.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative Genomic Analysis of Lactobacillus plantarum GB-LP1 Isolated from Traditional Korean Fermented Food. Yu J, et al. J Microbiol Biotechnol, 2017 Aug 28. PMID 28621109
    2. Formation and dimerization of the phosphodiesterase active site of the Pseudomonas aeruginosa MorA, a bi-functional c-di-GMP regulator. Phippen CW, et al. FEBS Lett, 2014 Dec 20. PMID 25447517
    3. Dimerisation induced formation of the active site and the identification of three metal sites in EAL-phosphodiesterases. Bellini D, et al. Sci Rep, 2017 Feb 10. PMID 28186120, Free PMC Article
    4. Structural insight into the mechanism of c-di-GMP hydrolysis by EAL domain phosphodiesterases. Tchigvintsev A, et al. J Mol Biol, 2010 Sep 24. PMID 20691189, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    EAL domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP028221.1 Reference assembly

      Range
      495723..496547
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_003642599.1 MULTISPECIES: EAL domain-containing protein [Lactiplantibacillus]

      See identical proteins and their annotated locations for WP_003642599.1

      UniProtKB/TrEMBL
      A0A0G9FBE5, A0A2S3U2D0, A0A837NN26, A0A837P6F5, A0AAW3FLQ5, F9URJ1
      Conserved Domains (1) summary
      COG2200
      Location:40 → 268
      EAL; EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) [Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version

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