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    C7M33_RS03665 helix-turn-helix domain-containing protein [ Lactiplantibacillus plantarum ]

    Gene ID: 77216167, updated on 17-Oct-2024

    Summary

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    Gene symbol
    C7M33_RS03665
    Gene description
    helix-turn-helix domain-containing protein
    Locus tag
    C7M33_RS03665
    Gene type
    protein coding
    Organism
    Lactiplantibacillus plantarum (strain: SRCM100442)
    Lineage
    Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactiplantibacillus
    Old locus tag
    C7M33_00736
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    Genomic context

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    NZ_CP028221.1Genomic Context describing neighboring genes Neighboring gene metallophosphoesterase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene PTS glucose transporter subunit IIA Neighboring gene PTS sugar transporter subunit IIB

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP028221.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of the SN35N Strain-Specific Exopolysaccharide Encoded in the Whole Circular Genome of a Plant-Derived Lactobacillus plantarum. Noda M, et al. Biol Pharm Bull, 2018. PMID 29607926
    2. XRE transcription factors conserved in Caulobacter and φCbK modulate adhesin development and phage production. McLaughlin M, et al. PLoS Genet, 2023 Nov. PMID 37972151, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    helix-turn-helix domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP028221.1 Reference assembly

      Range
      755117..755938
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011102002.1 MULTISPECIES: helix-turn-helix domain-containing protein [Lactiplantibacillus]

      See identical proteins and their annotated locations for WP_011102002.1

      UniProtKB/TrEMBL
      A0A151G4U5, A0A837NK39, A0AAN1Q2N7, F9USD4
      Conserved Domains (1) summary
      cd00093
      Location:9 → 67
      HTH_XRE; Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    KAE9508691.1