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    rbsD D-ribose pyranase [ Vibrio breoganii ]

    Gene ID: 77307054, updated on 14-Oct-2024

    Summary

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    Gene symbol
    rbsD
    Gene description
    D-ribose pyranase
    Locus tag
    OCU35_RS13455
    Gene type
    protein coding
    Organism
    Vibrio breoganii (strain: CAIM 1829, culture-collection: CAIM:1829)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
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    Genomic context

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    Location:
    chromosome: 2

    2 - NZ_AP024865.1Genomic Context describing neighboring genes Neighboring gene ribose ABC transporter substrate-binding protein RbsB Neighboring gene ribose ABC transporter permease Neighboring gene ribose ABC transporter ATP-binding protein RbsA Neighboring gene LysR family transcriptional regulator Neighboring gene DUF1656 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_AP024865.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Crystallization and preliminary X-ray crystallographic analysis of Escherichia coli RbsD, a component of the ribose-transport system with unknown biochemical function. Kim MS, et al. Acta Crystallogr D Biol Crystallogr, 2001 May. PMID 11320319
    2. Crystal structures of RbsD leading to the identification of cytoplasmic sugar-binding proteins with a novel folding architecture. Kim MS, et al. J Biol Chem, 2003 Jul 25. PMID 12738765
    3. NMR application probes a novel and ubiquitous family of enzymes that alter monosaccharide configuration. Ryu KS, et al. J Biol Chem, 2004 Jun 11. PMID 15060078
    4. Structural insights into the monosaccharide specificity of Escherichia coli rhamnose mutarotase. Ryu KS, et al. J Mol Biol, 2005 May 27. PMID 15876375

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    D-ribose pyranase
    WP_065210972.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_AP024865.1 Reference assembly

      Range
      31517..31936 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_065210972.1 D-ribose pyranase [Vibrio breoganii]

      UniProtKB/TrEMBL
      A0AAN0XZ37
      Conserved Domains (1) summary
      PRK11797
      Location:1 → 139
      PRK11797; D-ribose pyranase; Provisional
    Nucleotide Protein
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