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    LOC778439 deoxymugineic acid synthase 1 [ Zea mays ]

    Gene ID: 778439, updated on 27-Nov-2024

    Summary

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    Gene symbol
    LOC778439
    Gene description
    deoxymugineic acid synthase 1
    Locus tag
    ZEAMMB73_Zm00001d028360
    See related
    EnsemblRapid:Zm00001eb010040
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    AR6; DMAS1; ZmDMAS1; GRMZM2G060952
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    Genomic context

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    See LOC778439 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 1 NC_050096.1 (31742344..31744896)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 1 NC_024459.2 (32049732..32052284)

    Chromosome 1 - NC_050096.1Genomic Context describing neighboring genes Neighboring gene putative tetratricopeptide repeat domain containing family protein Neighboring gene uncharacterized LOC100282600 Neighboring gene uncharacterized LOC103633308 Neighboring gene uncharacterized LOC100277213

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning and characterization of deoxymugineic acid synthase genes from graminaceous plants. Bashir K, et al. J Biol Chem, 2006 Oct 27. PMID 16926158
    2. Short-chain dehydrogenase/reductase catalyzing the final step of noscapine biosynthesis is localized to laticifers in opium poppy. Chen X, et al. Plant J, 2014 Jan. PMID 24708518
    3. Characterization of the maize endosperm transcriptome and its comparison to the rice genome. Lai J, et al. Genome Res, 2004 Oct. PMID 15466291, Free PMC Article
    4. Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing. Vega-Arreguín JC, et al. BMC Genomics, 2009 Jul 6. PMID 19580677, Free PMC Article
    5. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables aldose reductase (NADPH) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    deoxymugineic acid synthase 1
    Names
    NAD(P)-linked oxidoreductase superfamily protein
    aldose reductase
    putative oxidoreductase, aldo/keto reductase family protein
    NP_001105931.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001112461.1 → NP_001105931.1  deoxymugineic acid synthase 1

      See identical proteins and their annotated locations for NP_001105931.1

      Status: PROVISIONAL

      Source sequence(s)
      AB269909
      UniProtKB/Swiss-Prot
      B4F9A4, Q0PCF2
      Related
      Zm00001eb010040_P003, Zm00001eb010040_T003
      Conserved Domains (2) summary
      COG0656
      Location:11 → 285
      ARA1; Aldo/keto reductase, related to diketogulonate reductase [Secondary metabolites biosynthesis, transport and catabolism]
      COG0667
      Location:5 → 285
      Tas; Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) [General function prediction only]

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050096.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      31742344..31744896
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B4F9A4.1 GenPept UniProtKB/Swiss-Prot:B4F9A4

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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    Research Materials