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    ikk-epsilon IkappaB kinase [ Ciona intestinalis (vase tunicate) ]

    Gene ID: 778650, updated on 3-Dec-2024

    Summary

    Gene symbol
    ikk-epsilon
    Gene description
    IkappaB kinase
    See related
    Ensembl:ENSCING00000005640
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Ciona intestinalis
    Lineage
    Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
    Also known as
    Tbk1
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    Genomic context

    See ikk-epsilon in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    104 current KH (GCF_000224145.3) 8 NC_020173.2 (5257388..5300330)

    Chromosome 8 - NC_020173.2Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L18a Neighboring gene exportin-T Neighboring gene E3 ubiquitin-protein ligase KCMF1 Neighboring gene uncharacterized LOC113474465

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_020173.2 Chromosome 8 Reference KH Primary Assembly

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-serine phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    IkappaB kinase; ikappaB kinase
    Names
    Ci-IKK-epsilon

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001078272.2NP_001071740.2  IkappaB kinase

      Status: VALIDATED

      Source sequence(s)
      EAAA01002740
      UniProtKB/TrEMBL
      A0A1W5BCZ1, F7A8T7, Q4H3B9
      Related
      ENSCINP00000011687, ENSCINT00000011687
    2. NM_001078566.3NP_001072034.2  IkappaB kinase

      Status: VALIDATED

      Source sequence(s)
      EAAA01002740
      UniProtKB/TrEMBL
      A0A1W5BCZ1, F7A8T7, Q4H3B9

    RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference KH Primary Assembly

    Genomic

    1. NC_020173.2 Reference KH Primary Assembly

      Range
      5257388..5300330
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018812716.2XP_018668261.1  ikappaB kinase isoform X1

      UniProtKB/TrEMBL
      A0A1W5BCZ1, F7A8T7, Q4H3B9
    2. XM_026835341.1XP_026691142.1  ikappaB kinase isoform X1