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    TTHERM_00636970 60S acidic ribosomal protein P0 [ Tetrahymena thermophila SB210 ]

    Gene ID: 7846552, updated on 28-Dec-2023

    Summary

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    Gene symbol
    TTHERM_00636970
    Gene description
    60S acidic ribosomal protein P0
    Locus tag
    TTHERM_00636970
    Gene type
    protein coding
    RNA name
    60S acidic ribosomal protein P0
    RefSeq status
    PROVISIONAL
    Organism
    Tetrahymena thermophila SB210 (strain: SB210)
    Lineage
    Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena
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    Genomic context

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    See TTHERM_00636970 in Genome Data Viewer
    Exon count:
    3

    NW_002476302.1Genomic Context describing neighboring genes Neighboring gene mannosyl-oligosaccharide glucosidase Neighboring gene transmembrane protein, putative Neighboring gene zinc finger protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_002476302.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables large ribosomal subunit rRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosomal large subunit assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    60S acidic ribosomal protein P0
    XP_001032358.2
    • encoded by transcript TTHERM_00636970A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_002476302.1 Reference assembly

      Range
      43438..45952
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001032358.3 → XP_001032358.2  60S acidic ribosomal protein P0 [Tetrahymena thermophila SB210]

      See identical proteins and their annotated locations for XP_001032358.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q22HK6, Q52H29
      Conserved Domains (3) summary
      cd05795
      Location:15 → 200
      Ribosomal_P0_L10e; Ribosomal protein L10 family, P0 and L10e subfamily; composed of eukaryotic 60S ribosomal protein P0 and the archaeal P0 homolog, L10e. P0 or L10e forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk ...
      PTZ00135
      Location:15 → 324
      PTZ00135; 60S acidic ribosomal protein P0; Provisional
      pfam00428
      Location:250 → 323
      Ribosomal_60s; 60s Acidic ribosomal protein
    Nucleotide Protein
    Heading Accession and Version

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