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    DYH36_RS12850 type I DNA topoisomerase [ Vibrio metschnikovii ]

    Gene ID: 79889086, updated on 20-Nov-2023

    Summary

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    Gene symbol
    DYH36_RS12850
    Gene description
    type I DNA topoisomerase
    Locus tag
    DYH36_RS12850
    Gene type
    protein coding
    Organism
    Vibrio metschnikovii (strain: NCTC8443, serovar: not available: to be reported later, type-material: type strain of Vibrio metschnikovii)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
    Old locus tag
    NCTC8443_02629
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    Genomic context

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    NZ_UHIH01000001.1Genomic Context describing neighboring genes Neighboring gene LysM peptidoglycan-binding domain-containing protein Neighboring gene DNA-processing protein DprA Neighboring gene DUF494 family protein Neighboring gene FMN-binding protein MioC Neighboring gene response regulator Neighboring gene diguanylate cyclase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_UHIH01000001.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenomics of DNA topoisomerases: their origin and putative roles in the emergence of modern organisms. Forterre P, et al. Nucleic Acids Res, 2009 Feb. PMID 19208647, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    type I DNA topoisomerase
    WP_040905790.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_UHIH01000001.1 Reference assembly

      Range
      2816870..2817442
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_040905790.1 type I DNA topoisomerase [Vibrio metschnikovii]

      UniProtKB/TrEMBL
      A0A9X0RDK2
      Conserved Domains (2) summary
      COG0551
      Location:45 → 186
      YrdD; ssDNA-binding Zn-finger and Zn-ribbon domains of topoisomerase 1 [Replication, recombination and repair]
      cl27598
      Location:21 → 54
      TOP1Bc; Bacterial DNA topoisomeraes I ATP-binding domain
    Nucleotide Protein
    Heading Accession and Version

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