U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    PF3D7_0109800 phenylalanine--tRNA ligase alpha subunit [ Plasmodium falciparum 3D7 ]

    Gene ID: 813233, updated on 12-Sep-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    PF3D7_0109800
    Gene description
    phenylalanine--tRNA ligase alpha subunit
    Locus tag
    PF3D7_0109800
    See related
    PlasmoDB:PF3D7_0109800; VEuPathDB:PF3D7_0109800
    Gene type
    protein coding
    RNA name
    phenylalanine--tRNA ligase alpha subunit
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PF3D7_0109800 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_004325.2 (380697..382424)

    Chromosome 1 - NC_004325.2Genomic Context describing neighboring genes Neighboring gene cold-shock protein, putative Neighboring gene rRNA biogenesis protein RRP36, putative Neighboring gene phosphatidate cytidylyltransferase, putative Neighboring gene conserved protein, unknown function

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_004325.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Diversity-oriented synthesis yields novel multistage antimalarial inhibitors. Kato N, et al. Nature, 2016 Oct 20. PMID 27602946, Free PMC Article
    2. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    3. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables phenylalanine-tRNA ligase activity ISM
    Inferred from Sequence Model
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within phenylalanyl-tRNA aminoacylation ISM
    Inferred from Sequence Model
    more info
    		  
    acts_upstream_of_or_within response to xenobiotic stimulus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus HDA PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    phenylalanine--tRNA ligase alpha subunit
    XP_001351028.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004325.2 Reference assembly

      Range
      380697..382424
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350992.1 → XP_001351028.1  phenylalanine--tRNA ligase alpha subunit [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351028.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024VFW4, A0A024VI32, A0A024WE09, A0A024WXB0, A0A024XFW4, A0A0L1I8A0, Q8I246, W4IR26, W4J6T8, W7FV38, W7G5R7, W7K1E7
      Conserved Domains (1) summary
      PTZ00326
      Location:72 → 575
      PTZ00326; phenylalanyl-tRNA synthetase alpha chain; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials