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    Btnl5-ps butyrophilin-like 5, pseudogene [ Mus musculus (house mouse) ]

    Gene ID: 81497, updated on 17-Aug-2024

    Summary

    Official Symbol
    Btnl5-psprovided by MGI
    Official Full Name
    butyrophilin-like 5, pseudogeneprovided by MGI
    Primary source
    MGI:MGI:1932037
    See related
    AllianceGenome:MGI:1932037
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    NG12; Btnl5; Gm15330
    Expression
    Biased expression in large intestine adult (RPKM 74.8), small intestine adult (RPKM 38.5) and 3 other tissues See more
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    Genomic context

    See Btnl5-ps in Genome Data Viewer
    Location:
    17 B1; 17 18.08 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (34706379..34716403, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (34487405..34497429, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E4211 Neighboring gene testis expressed basic protein 1 Neighboring gene butyrophilin-like 4 Neighboring gene predicted gene 15331 Neighboring gene butyrophilin-like 6

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_004051.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      CT009767

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      34706379..34716403 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_002677.2: Suppressed sequence

      Description
      NG_002677.2: This RefSeq was permanently suppressed because it was defined on the wrong strand.