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    PAS_chr2-1_0423 Beta subunit of the oligosaccharyl transferase (OST) glycoprotein complex [ Komagataella phaffii GS115 ]

    Gene ID: 8198108, updated on 23-Nov-2023

    Summary

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    Gene symbol
    PAS_chr2-1_0423
    Gene description
    Beta subunit of the oligosaccharyl transferase (OST) glycoprotein complex
    Locus tag
    PAS_chr2-1_0423
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Komagataella phaffii GS115 (strain: GS115)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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    Genomic context

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    See PAS_chr2-1_0423 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_012964.1 (777240..778535, complement)

    Chromosome 2 - NC_012964.1Genomic Context describing neighboring genes Neighboring gene Acireductone dioxygenease involved in the methionine salvage pathway Neighboring gene uncharacterized protein Neighboring gene Phosphatidylinositol 4,5-bisphosphate 5-phosphatase, synaptojanin-like protein with an N-terminal Sa Neighboring gene Hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_012964.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein N-linked glycosylation via asparagine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of oligosaccharyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Beta subunit of the oligosaccharyl transferase (OST) glycoprotein complex

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_012964.1 Reference assembly

      Range
      777240..778535 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002491281.1 → XP_002491326.1  Beta subunit of the oligosaccharyl transferase (OST) glycoprotein complex [Komagataella phaffii GS115]

      See identical proteins and their annotated locations for XP_002491326.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C4R0M2, F2QT30
      Conserved Domains (1) summary
      pfam03345
      Location:29 → 426
      DDOST_48kD; Oligosaccharyltransferase 48 kDa subunit beta
    Nucleotide Protein
    Heading Accession and Version

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