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    LOC8266438 tetraspanin-10 [ Ricinus communis (castor bean) ]

    Gene ID: 8266438, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC8266438
    Gene description
    tetraspanin-10
    Locus tag
    RCOM_1686110
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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    Genomic context

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    See LOC8266438 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 5 NC_063260.1 (25127659..25131415, complement)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994274.1 (2361607..2364969, complement)

    Chromosome 5 - NC_063260.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC8265465 Neighboring gene salutaridine reductase-like Neighboring gene uncharacterized LOC8266439 Neighboring gene LIM domain-containing protein WLIM2b

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in auxin-activated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasmodesma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tetraspanin-10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063260.1 Reference ASM1957865v1

      Range
      25127659..25131415 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002509720.4 → XP_002509766.1  tetraspanin-10

      See identical proteins and their annotated locations for XP_002509766.1

      UniProtKB/TrEMBL
      B9RC82
      Conserved Domains (1) summary
      pfam00335
      Location:9 → 259
      Tetraspannin; Tetraspanin family
    Nucleotide Protein
    Heading Accession and Version

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