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    LOC8270848 peptidyl-prolyl cis-trans isomerase CYP22 [ Ricinus communis (castor bean) ]

    Gene ID: 8270848, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC8270848
    Gene description
    peptidyl-prolyl cis-trans isomerase CYP22
    Locus tag
    RCOM_1451950
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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    Genomic context

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    See LOC8270848 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 8 NC_063263.1 (13346976..13349234)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994282.1 (1949122..1951344)

    Chromosome 8 - NC_063263.1Genomic Context describing neighboring genes Neighboring gene transcription termination factor MTERF6, chloroplastic/mitochondrial-like Neighboring gene protein unc-13 homolog Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 Neighboring gene transcription factor TGA6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables peptidyl-prolyl cis-trans isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein peptidyl-prolyl isomerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peptidyl-prolyl cis-trans isomerase CYP22

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063263.1 Reference ASM1957865v1

      Range
      13346976..13349234
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002512979.4 → XP_002513025.2  peptidyl-prolyl cis-trans isomerase CYP22

      UniProtKB/TrEMBL
      B9RG73
    Nucleotide Protein
    Heading Accession and Version

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