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    LOC8275083 phosphopantothenoylcysteine decarboxylase [ Ricinus communis (castor bean) ]

    Gene ID: 8275083, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC8275083
    Gene description
    phosphopantothenoylcysteine decarboxylase
    Locus tag
    RCOM_0576840
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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    Genomic context

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    See LOC8275083 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 4 NC_063259.1 (22524381..22527302)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994498.1 (32099..35043, complement)

    Chromosome 4 - NC_063259.1Genomic Context describing neighboring genes Neighboring gene auxin-responsive protein IAA32 Neighboring gene receptor protein kinase-like protein ZAR1 Neighboring gene uncharacterized LOC8275080 Neighboring gene uncharacterized LOC125369887

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables FMN binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphopantothenoylcysteine decarboxylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in coenzyme A biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of phosphopantothenoylcysteine decarboxylase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphopantothenoylcysteine decarboxylase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063259.1 Reference ASM1957865v1

      Range
      22524381..22527302
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015723623.3 → XP_015579109.1  phosphopantothenoylcysteine decarboxylase

      UniProtKB/TrEMBL
      B9SJW3
      Conserved Domains (1) summary
      PLN02496
      Location:4 → 212
      PLN02496; probable phosphopantothenoylcysteine decarboxylase

    2. XM_002526236.4 → XP_002526282.1  phosphopantothenoylcysteine decarboxylase

      UniProtKB/TrEMBL
      B9SJW3
      Conserved Domains (1) summary
      PLN02496
      Location:4 → 212
      PLN02496; probable phosphopantothenoylcysteine decarboxylase

    RNA

    1. XR_007215654.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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