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    LDO45 Ldo45p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 855178, updated on 2-Nov-2024

    Summary

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    Official Symbol
    LDO45
    Official Full Name
    Ldo45p
    Primary source
    SGD:S000004755
    Locus tag
    YMR147W
    See related
    AllianceGenome:SGD:S000004755; FungiDB:YMR147W; VEuPathDB:YMR147W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Involved in lipid droplet organization. Located in cell periphery. Is active in lipid droplet. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See LDO45 in Genome Data Viewer
    Location:
    chromosome: XIII
    Exon count:
    2
    Sequence:
    Chromosome: XIII; NC_001145.3 (559199..560812)

    Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene NADH-ubiquinone reductase (H(+)-translocating) NDE1 Neighboring gene translation initiation factor eIF3 subunit i Neighboring gene Ldo16p Neighboring gene dolichyl-diphosphooligosaccharide-protein glycotransferase Neighboring gene endopeptidase catalytic subunit IMP1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001145.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Scan statistics analysis for detection of introns in time-course tiling array data. Reiner-Benaim A, et al. Stat Appl Genet Mol Biol, 2014 Apr 1. PMID 24572987
    2. LDO proteins and Vac8 form a vacuole-lipid droplet contact site to enable starvation-induced lipophagy in yeast. Álvarez-Guerra I, et al. Dev Cell, 2024 Mar 25. PMID 38354739
    3. A metabolically controlled contact site between vacuoles and lipid droplets in yeast. Diep DTV, et al. Dev Cell, 2024 Mar 25. PMID 38367622
    4. Identification of seipin-linked factors that act as determinants of a lipid droplet subpopulation. Eisenberg-Bord M, et al. J Cell Biol, 2018 Jan 2. PMID 29187527, Free PMC Article
    5. Regulation of lipid droplets by metabolically controlled Ldo isoforms. Teixeira V, et al. J Cell Biol, 2018 Jan 2. PMID 29187528, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables protein-containing complex binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid droplet organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell periphery HDA PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in lipid droplet IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in lipid droplet IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Ldo45p
    NP_013867.2
    • hypothetical protein; SWAT-GFP and mCherry fusion proteins localize to the cell periphery

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001145.3 Reference assembly

      Range
      559199..560812
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182649.2 → NP_013867.2  TPA: Ldo45p [Saccharomyces cerevisiae S288C]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VZW9, P40218
    Nucleotide Protein
    Heading Accession and Version

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