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    RPL36B ribosomal 60S subunit protein L36B [ Saccharomyces cerevisiae S288C ]

    Gene ID: 855826, updated on 9-Dec-2024

    Summary

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    Official Symbol
    RPL36B
    Official Full Name
    ribosomal 60S subunit protein L36B
    Primary source
    SGD:S000006438
    Locus tag
    YPL249C-A
    See related
    AllianceGenome:SGD:S000006438; FungiDB:YPL249C-A; VEuPathDB:YPL249C-A
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Enables RNA binding activity. A structural constituent of ribosome. Involved in cytoplasmic translation. Part of cytosolic large ribosomal subunit. Orthologous to human RPL36 (ribosomal protein L36). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See RPL36B in Genome Data Viewer
    Location:
    chromosome: XVI
    Exon count:
    2
    Sequence:
    Chromosome: XVI; NC_001148.4 (75699..76239, complement)

    Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene adrenodoxin Neighboring gene Atg41p Neighboring gene GTPase-activating protein GYP5 Neighboring gene ncRNA Neighboring gene galactose-responsive transcription factor GAL4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001148.4

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nα-acetyltransferase NatA is involved in ribosome synthesis in Saccharomyces cerevisiae. Wan K, et al. Biosci Biotechnol Biochem, 2013. PMID 23470771
    2. Roles of Ebp2 and ribosomal protein L36 in ribosome biogenesis in Saccharomyces cerevisiae. Wan K, et al. Curr Genet, 2015 Feb. PMID 25119672
    3. Identification of new cell size control genes in S. cerevisiae. Dungrawala H, et al. Cell Div, 2012 Dec 12. PMID 23234503, Free PMC Article
    4. Binding of proteins from the large ribosomal subunits to 5.8 S rRNA of Saccharomyces cerevisiae. Lee JC, et al. J Biol Chem, 1983 Jan 25. PMID 6337137
    5. Yeast ribosomal proteins. VIII. Isolation of two proteins and sequence characterization of twenty-four proteins from cytoplasmic ribosomes. Otaka E, et al. Mol Gen Genet, 1984. PMID 18782943

    See all (76) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables RNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in cytoplasmic translation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic large ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ribosomal 60S subunit protein L36B
    NP_015074.1
    • Ribosomal 60S subunit protein L36B; binds to 5.8 S rRNA; homologous to mammalian ribosomal protein L36, no bacterial homolog; RPL36B has a paralog, RPL36A, that arose from the whole genome duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001148.4 Reference assembly

      Range
      75699..76239 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001184312.1 → NP_015074.1  TPA: ribosomal 60S subunit protein L36B [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_015074.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W3C1, O14455
      UniProtKB/TrEMBL
      A6ZMQ5, A6ZW06, B3LKI2, C7GTQ7, C8ZF58, C8ZIC9, G2WKP9, G2WNT5, N1NXC9
      Conserved Domains (1) summary
      pfam01158
      Location:4 → 99
      Ribosomal_L36e; Ribosomal protein L36e
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O14455.3

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