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    ratA type II toxin-antitoxin system toxin RatA [ Citrobacter portucalensis ]

    Gene ID: 86975150, updated on 3-Dec-2024

    Summary

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    Gene symbol
    ratA
    Gene description
    type II toxin-antitoxin system toxin RatA
    Locus tag
    LY264_RS06210
    Gene type
    protein coding
    Organism
    Citrobacter portucalensis (strain: Cf7303, nat-host: Homo sapiens)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex
    Old locus tag
    LY264_06210
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    Genomic context

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    NZ_CP092466.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene RnfH family protein Neighboring gene SsrA-binding protein SmpB Neighboring gene outer membrane protein assembly factor BamE Neighboring gene DNA repair protein RecN

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP092466.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RatA (YfjG), an Escherichia coli toxin, inhibits 70S ribosome association to block translation initiation. Zhang Y, et al. Mol Microbiol, 2011 Mar. PMID 21323758, Free PMC Article
    2. Genetic Characterization of bla (NDM-1)-Carrying Citrobacter portucalensis Sequence Type 328 and Citrobacter freundii Sequence Type 98. Wang L, et al. Infect Drug Resist, 2022. PMID 35510156, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    type II toxin-antitoxin system toxin RatA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP092466.1 Reference assembly

      Range
      1297092..1297535
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_003826396.1 MULTISPECIES: type II toxin-antitoxin system toxin RatA [Citrobacter]

      UniProtKB/TrEMBL
      A0A7I6XUA0, A0AAE3RWH5, A0AAP5PMZ8, A0AAU7HMQ8, A0AAW7ELH2
    Nucleotide Protein
    Heading Accession and Version