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    ABOO_RS05230 ATP-binding protein [ Aciduliprofundum boonei T469 ]

    Gene ID: 8827993, updated on 22-Oct-2024

    Summary

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    Gene symbol
    ABOO_RS05230
    Gene description
    ATP-binding protein
    Locus tag
    ABOO_RS05230
    Gene type
    protein coding
    Organism
    Aciduliprofundum boonei T469 (strain: T469)
    Lineage
    Archaea; Methanobacteriati; Thermoplasmatota; DHVE2 group; Candidatus Aciduliprofundum
    Old locus tag
    Aboo_1036
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    Genomic context

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    Sequence:
    NC_013926.1 (994510..997182, complement)

    NC_013926.1Genomic Context describing neighboring genes Neighboring gene MBL fold metallo-hydrolase Neighboring gene hypothetical protein Neighboring gene metallophosphoesterase Neighboring gene DUF6293 family protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_013926.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Electron microscopy encounters with unusual thermophiles helps direct genomic analysis of Aciduliprofundum boonei. Reysenbach AL, et al. Geobiology, 2008 Jun. PMID 18445019
    2. Phylogenetic analysis of AAA proteins. Frickey T, et al. J Struct Biol, 2004 Apr-May. PMID 15037233
    3. Classification of AAA+ proteins. Ammelburg M, et al. J Struct Biol, 2006 Oct. PMID 16828312
    4. The AAA+ superfamily of functionally diverse proteins. Snider J, et al. Genome Biol, 2008 Apr 30. PMID 18466635, Free PMC Article
    5. Evolutionary history and higher order classification of AAA+ ATPases. Iyer LM, et al. J Struct Biol, 2004 Apr-May. PMID 15037234

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    ATP-binding protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_013926.1 Reference assembly

      Range
      994510..997182 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_008086593.1 ATP-binding protein [Candidatus Aciduliprofundum boonei]

      See identical proteins and their annotated locations for WP_008086593.1

      UniProtKB/TrEMBL
      B5IHB6
      Conserved Domains (3) summary
      cl14654
      Location:429 → 659
      V_Alix_like; Protein-interacting V-domain of mammalian Alix and related domains
      cl00146
      Location:173 → 360
      TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme
      cl21455
      Location:802 → 878
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version

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