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    LOC9322192 serine/threonine-protein kinase STY8 [ Arabidopsis lyrata subsp. lyrata ]

    Gene ID: 9322192, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC9322192
    Gene description
    serine/threonine-protein kinase STY8
    Locus tag
    ARALYDRAFT_900118
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    See LOC9322192 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302553.1 (22201108..22205076, complement)

    NW_003302553.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9322191 Neighboring gene F-box protein At2g17690 Neighboring gene UPF0548 protein At2g17695 Neighboring gene peptide methionine sulfoxide reductase MsrB Neighboring gene uncharacterized LOC9320144

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003302553 Unplaced Scaffold Reference v.1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein kinase STY8
    Names
    kinase family protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v.1.0 Primary Assembly

    Genomic

    1. NW_003302553.1 Reference v.1.0 Primary Assembly

      Range
      22201108..22205076 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002886080.2 → XP_002886126.2  serine/threonine-protein kinase STY8

      UniProtKB/TrEMBL
      D7L9H4
      Conserved Domains (2) summary
      cd04928
      Location:172 → 239
      ACT_TyrKc; Uncharacterized, N-terminal ACT domain of an Arabidopsis/Oryza predicted tyrosine kinase and other related ACT domains
      cd13999
      Location:292 → 535
      STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases
    Nucleotide Protein
    Heading Accession and Version

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