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    xerD site-specific tyrosine recombinase XerD [ Parabacteroides johnsonii DSM 18315 ]

    Gene ID: 93409367, updated on 27-Aug-2024

    Summary

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    Gene symbol
    xerD
    Gene description
    site-specific tyrosine recombinase XerD
    Locus tag
    NQ564_RS13970
    Gene type
    protein coding
    Organism
    Parabacteroides johnsonii DSM 18315 (strain: DSM 18315, nat-host: Homo sapiens, culture-collection: DSM:18315, type-material: type strain of Parabacteroides johnsonii)
    Lineage
    Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides
    Old locus tag
    NQ564_13970
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    Genomic context

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    NZ_CP102285.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene type II 3-dehydroquinate dehydratase Neighboring gene DUF4954 family protein Neighboring gene GTPase HflX Neighboring gene T9SS type A sorting domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP102285.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Xer Site Specific Recombination: Double and Single Recombinase Systems. Castillo F, et al. Front Microbiol, 2017. PMID 28373867, Free PMC Article
    2. Design, construction, and in vivo augmentation of a complex gut microbiome. Cheng AG, et al. Cell, 2022 Sep 15. PMID 36070752, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    site-specific tyrosine recombinase XerD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP102285.1 Reference assembly

      Range
      3331911..3332816
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_008146192.1 site-specific tyrosine recombinase XerD [Parabacteroides johnsonii]

      See identical proteins and their annotated locations for WP_008146192.1

      UniProtKB/TrEMBL
      A0A9Q5SUY9, B7B5F7
    Nucleotide Protein
    Heading Accession and Version