U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    tnpA IS200/IS605 family transposase [ Roseburia hominis A2-183 ]

    Gene ID: 93722910, updated on 19-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    tnpA
    Gene description
    IS200/IS605 family transposase
    Locus tag
    RHOM_RS05265
    Gene type
    protein coding
    Organism
    Roseburia hominis A2-183 (strain: A2-183, culture-collection: DSM:16839, culture-collection: NCIMB:NCIMB 14029, type-material: type strain of Roseburia hominis)
    Lineage
    Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Roseburia
    Old locus tag
    RHOM_05360
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_015977.1 (1171700..1172128)

    NC_015977.1Genomic Context describing neighboring genes Neighboring gene 4-hydroxy-tetrahydrodipicolinate reductase Neighboring gene fructose-bisphosphatase class III Neighboring gene deoxyribonuclease IV Neighboring gene aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_015977.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Homologues of bacterial TnpB_IS605 are widespread in diverse eukaryotic transposable elements. Bao W, et al. Mob DNA, 2013 Apr 1. PMID 23548000, Free PMC Article
    2. Complete Genome Sequence of the Human Gut Symbiont Roseburia hominis. Travis AJ, et al. Genome Announc, 2015 Nov 5. PMID 26543119, Free PMC Article
    3. Exploring bacterial insertion sequences with ISfinder: objectives, uses, and future developments. Siguier P, et al. Methods Mol Biol, 2012. PMID 22367867

    GeneRIFs: Gene References Into Functions

    General protein information

    Go to the top of the page Help
    Preferred Names
    IS200/IS605 family transposase

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_015977.1 Reference assembly

      Range
      1171700..1172128
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_014079236.1 IS200/IS605 family transposase [Roseburia hominis]

      See identical proteins and their annotated locations for WP_014079236.1

      UniProtKB/TrEMBL
      G2T2G8