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    rpmJ 50S ribosomal protein L36 [ Ruminococcus bromii ]

    Gene ID: 93768256, updated on 29-Aug-2024

    Summary

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    Gene symbol
    rpmJ
    Gene description
    50S ribosomal protein L36
    Locus tag
    QDF94_RS03135
    Gene type
    protein coding
    Organism
    Ruminococcus bromii (isolate: COPD257, nat-host: Homo sapiens, metagenome-source: human gut metagenome)
    Lineage
    Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; Ruminococcus
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    Genomic context

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    NZ_WHBW01000006.1Genomic Context describing neighboring genes Neighboring gene 30S ribosomal protein S11 Neighboring gene 30S ribosomal protein S13 Neighboring gene translation initiation factor IF-1 Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_WHBW01000006.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The metal binding properties of the CCCH motif of the 50S ribosomal protein L36 from Thermus thermophilus. Boysen RI, et al. J Pept Res, 2001 Jan. PMID 11168885
    2. The solution structure of ribosomal protein L36 from Thermus thermophilus reveals a zinc-ribbon-like fold. Härd T, et al. J Mol Biol, 2000 Feb 11. PMID 10656825
    3. Comparative genomics of bacterial zinc regulons: enhanced ion transport, pathogenesis, and rearrangement of ribosomal proteins. Panina EM, et al. Proc Natl Acad Sci U S A, 2003 Aug 19. PMID 12904577, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    50S ribosomal protein L36

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_WHBW01000006.1 Reference assembly

      Range
      18560..18673 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_015523208.1 MULTISPECIES: 50S ribosomal protein L36 [Clostridia]

      See identical proteins and their annotated locations for WP_015523208.1

      UniProtKB/TrEMBL
      A0A1C6DMF3, A0A2N0UQC9, A0A373KIX3, A0A373KYR8, A0A373KYX9, A0A373XU80, A0A373Y901, A0A374DFV7, A0A374DR57, A0A374G627, A0A374UMG1, A0A3C1CSD6, A0A3D2HT79, R6NYP4
    Nucleotide Protein
    Heading Accession and Version