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    HACJB3_RS09135 Single-stranded DNA binding protein [ Halalkalicoccus jeotgali B3 ]

    Gene ID: 9419694, updated on 22-Oct-2024

    Summary

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    Gene symbol
    HACJB3_RS09135
    Gene description
    Single-stranded DNA binding protein
    Locus tag
    HACJB3_RS09135
    Gene type
    protein coding
    Organism
    Halalkalicoccus jeotgali B3 (strain: B3, culture-collection: CECT:7217, culture-collection: DSM:DSM 18796, culture-collection: JCM:14584, culture-collection: KCTC:4019, type-material: type strain of Halalkalicoccus jeotgali)
    Lineage
    Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Halobacteria; Halobacteriales; Halococcaceae; Halalkalicoccus
    Old locus tag
    HacjB3_09425
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    Genomic context

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    Sequence:
    NC_014297.1 (1742691..1743959, complement)

    NC_014297.1Genomic Context describing neighboring genes Neighboring gene DEAD/DEAH box helicase Neighboring gene metallophosphoesterase Neighboring gene hypothetical protein Neighboring gene 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase Neighboring gene bacterio-opsin activator domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_014297.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete genome sequence of Halalkalicoccus jeotgali B3(T), an extremely halophilic archaeon. Roh SW, et al. J Bacteriol, 2010 Sep. PMID 20601480, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    Single-stranded DNA binding protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_014297.1 Reference assembly

      Range
      1742691..1743959 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_008417261.1 Single-stranded DNA binding protein [Halalkalicoccus jeotgali]

      See identical proteins and their annotated locations for WP_008417261.1

      UniProtKB/TrEMBL
      D8J3G1
      Conserved Domains (2) summary
      PRK07218
      Location:1 → 422
      PRK07218; replication factor A; Provisional
      cd04491
      Location:175 → 250
      SoSSB_OBF; SoSSB_OBF: A subfamily of OB folds similar to the OB fold of the crenarchaeote Sulfolobus solfataricus single-stranded (ss) DNA-binding protein (SSoSSB). SSoSSB has a single OB fold, and it physically and functionally interacts with RNA polymerase. In ...
    Nucleotide Protein
    Heading Accession and Version

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