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    yahF putative acyl-CoA synthetase YahF [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947298, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yahF
    Official Full Name
    putative acyl-CoA synthetase YahF
    Primary source
    ECOCYC:G6185
    Locus tag
    b0320
    See related
    ASAP:ABE-0001099
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0318
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    Genomic context

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    Sequence:
    NC_000913.3 (336778..338325)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YahC Neighboring gene ankyrin repeat-containing protein YahD Neighboring gene DUF2877 domain-containing protein YahE Neighboring gene DUF1116 domain-containing protein YahG Neighboring gene putative uncharacterized protein YahH Neighboring gene carbamate kinase-like protein YahI

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Zhang N, et al. Proteomics, 2007 Feb. PMID 17309111
    2. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables succinate-CoA ligase (ADP-forming) activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables succinate-CoA ligase (GDP-forming) activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in tricarboxylic acid cycle IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of succinate-CoA ligase complex (ADP-forming) IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    putative acyl-CoA synthetase YahF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      336778..338325
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414854.1 putative acyl-CoA synthetase YahF [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414854.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7EHJ2
      Conserved Domains (1) summary
      PRK06091
      Location:6 → 509
      PRK06091; membrane protein FdrA; Validated
    Nucleotide Protein
    Heading Accession and Version

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