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    ybeZ PhoH-like protein [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948044, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ybeZ
    Official Full Name
    PhoH-like protein
    Primary source
    ECOCYC:G6363
    Locus tag
    b0660
    See related
    ASAP:ABE-0002257
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0652; phoL
    Summary
    AFMB Structural Genomics target Number 14 (http://afmb.cnrs-mrs.fr/article171.html) ybeZ has been experimentally shown NOT to be part of the pho regulon: personal communication, March, 2003, B. [More information is available at EcoGene: EG13656]. YbeZ belongs to the Bacillus subtilis subfamily of PhoH proteins . [More information is available at EcoCyc: G6363].
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    Genomic context

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    Sequence:
    NC_000913.3 (692338..693378, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene apolipoprotein N-acyltransferase Neighboring gene CorC-HlyC family protein YbeX Neighboring gene endoribonuclease YbeY Neighboring gene isopentenyl-adenosine A37 tRNA methylthiolase Neighboring gene 3-demethoxyubiquinol 3-hydroxylase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bioinformatics classification and functional analysis of PhoH homologs. Kazakov AE, et al. In Silico Biol, 2003. PMID 12762842
    2. Identification of YbeY-Protein Interactions Involved in 16S rRNA Maturation and Stress Regulation in Escherichia coli. Vercruysse M, et al. mBio, 2016 Nov 8. PMID 27834201, Free PMC Article
    3. Interplay between the heat shock response and translation in Escherichia coli. Rasouly A, et al. Res Microbiol, 2009 May. PMID 19379808
    4. YbeY, a heat shock protein involved in translation in Escherichia coli. Rasouly A, et al. J Bacteriol, 2009 Apr. PMID 19181801, Free PMC Article
    5. The global transcriptional response of Escherichia coli to induced sigma 32 protein involves sigma 32 regulon activation followed by inactivation and degradation of sigma 32 in vivo. Zhao K, et al. J Biol Chem, 2005 May 6. PMID 15757896

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ATP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PhoH-like protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      692338..693378 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415193.2 PhoH-like protein [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415193.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A7T2IYE5
      Conserved Domains (1) summary
      COG1702
      Location:70 → 320
      PhoH; Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version

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