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    yiiG DUF3829 domain-containing lipoprotein YiiG [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948392, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yiiG
    Official Full Name
    DUF3829 domain-containing lipoprotein YiiG
    Primary source
    ECOCYC:EG11860
    Locus tag
    b3896
    See related
    ASAP:ABE-0012718
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3889
    Summary
    First 21 aa are a type II signal peptide. [More information is available at EcoGene: EG11860].
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    Genomic context

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    Sequence:
    NC_000913.3 (4087002..4088057)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene formate dehydrogenase O subunit alpha Neighboring gene sulfurtransferase for molybdenum cofactor sulfuration Neighboring gene putative DNA-binding transcriptional regulator FrvR Neighboring gene peptidase M42 family protein FrvX Neighboring gene putative PTS enzyme IIBC component FrvB

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the Escherichia coli genome. III. DNA sequence of the region from 87.2 to 89.2 minutes. Plunkett G 3rd, et al. Nucleic Acids Res, 1993 Jul 25. PMID 8346018, Free PMC Article
    2. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
    3. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    DUF3829 domain-containing lipoprotein YiiG

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4087002..4088057
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418332.1 DUF3829 domain-containing lipoprotein YiiG [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418332.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T5YDL9
      Conserved Domains (1) summary
      pfam12889
      Location:72 → 349
      DUF3829; Protein of unknown function (DUF3829)
    Nucleotide Protein
    Heading Accession and Version

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