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    NECHADRAFT_100723 hypothetical protein [ Fusarium vanettenii 77-13-4 ]

    Gene ID: 9668473, updated on 17-May-2024

    Summary

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    Gene symbol
    NECHADRAFT_100723
    Gene description
    hypothetical protein
    Locus tag
    NECHADRAFT_100723
    See related
    FungiDB:NECHADRAFT_100723; VEuPathDB:NECHADRAFT_100723
    Gene type
    protein coding
    RNA name
    uncharacterized protein
    RefSeq status
    PROVISIONAL
    Organism
    Fusarium vanettenii 77-13-4 (isolate: 77-13-4, culture-collection: FGSC:9596)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium solani species complex; Fusarium vanettenii
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    Genomic context

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    See NECHADRAFT_100723 in Genome Data Viewer
    Location:
    chromosome: 5, map: unlocalized
    Exon count:
    1

    NW_003315878.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene mitochondrial 37S ribosomal protein MRP2 Neighboring gene glycoside hydrolase family 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003315878.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion. Coleman JJ, et al. PLoS Genet, 2009 Aug. PMID 19714214, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of U2-type spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein
    XP_003051474.1
    • expressed hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003315878.1 Reference assembly

      Range
      2543577..2544972 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003051428.1 → XP_003051474.1  uncharacterized protein NECHADRAFT_100723 [Fusarium vanettenii 77-13-4]

      See identical proteins and their annotated locations for XP_003051474.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C7YT48
      Conserved Domains (2) summary
      pfam10197
      Location:11 → 47
      Cir_N; N-terminal domain of CBF1 interacting co-repressor CIR
      pfam12542
      Location:67 → 156
      CWC25; Pre-mRNA splicing factor
    Nucleotide Protein
    Heading Accession and Version

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