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    BRD2102 hypothetical protein [ Fusarium vanettenii 77-13-4 ]

    Gene ID: 9679145, updated on 17-May-2024

    Summary

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    Gene symbol
    BRD2102
    Gene description
    hypothetical protein
    Locus tag
    NECHADRAFT_37495
    See related
    FungiDB:NECHADRAFT_37495; VEuPathDB:NECHADRAFT_37495
    Gene type
    protein coding
    RNA name
    uncharacterized protein
    RefSeq status
    PROVISIONAL
    Organism
    Fusarium vanettenii 77-13-4 (isolate: 77-13-4, culture-collection: FGSC:9596)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium solani species complex; Fusarium vanettenii
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    Genomic context

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    See BRD2102 in Genome Data Viewer
    Location:
    chromosome: 4, map: unlocalized
    Exon count:
    5

    NW_003315830.1Genomic Context describing neighboring genes Neighboring gene DNA repair protein, SNF2 family Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003315830.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion. Coleman JJ, et al. PLoS Genet, 2009 Aug. PMID 19714214, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RSC-type complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003315830.1 Reference assembly

      Range
      162374..165572 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003040711.1 → XP_003040757.1  uncharacterized protein NECHADRAFT_37495 [Fusarium vanettenii 77-13-4]

      See identical proteins and their annotated locations for XP_003040757.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C7ZLT4
      Conserved Domains (4) summary
      cd04369
      Location:83 → 171
      Bromodomain; Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
      cd05522
      Location:271 → 374
      Bromo_Rsc1_2_II; Bromodomain, repeat II in Rsc1/2_like subfamily, specific to fungi. Rsc1 and Rsc2 are components of the RSC complex (remodeling the structure of chromatin), are essential for transcriptional control, and have a specific domain architecture including two ...
      COG5076
      Location:258 → 496
      COG5076; Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription]
      cd04717
      Location:401 → 523
      BAH_polybromo; BAH, or Bromo Adjacent Homology domain, as present in polybromo and yeast RSC1/2. The human polybromo protein (BAF180) is a component of the SWI/SNF chromatin-remodeling complex PBAF. It is thought that polybromo participates in transcriptional ...
    Nucleotide Protein
    Heading Accession and Version

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