U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    MICPUCDRAFT_12391 uncharacterized protein [ Micromonas pusilla CCMP1545 ]

    Gene ID: 9681239, updated on 1-Feb-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    MICPUCDRAFT_12391
    Gene description
    uncharacterized protein
    Locus tag
    MICPUCDRAFT_12391
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Micromonas pusilla CCMP1545 (strain: CCMP1545)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MICPUCDRAFT_12391 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_003315882.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_003315882.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Worden AZ, et al. Science, 2009 Apr 10. PMID 19359590
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 4-hydroxyphenylpyruvate dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tyrosine catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003315882.1 Reference assembly

      Range
      2181316..2182894 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003055776.1 → XP_003055822.1  uncharacterized protein MICPUCDRAFT_12391 [Micromonas pusilla CCMP1545]

      See identical proteins and their annotated locations for XP_003055822.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C1MJF3
      Conserved Domains (3) summary
      cd07250
      Location:220 → 402
      HPPD_C_like; C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)
      cd08342
      Location:38 → 204
      HPPD_N_like; N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)
      PLN02875
      Location:38 → 447
      PLN02875; 4-hydroxyphenylpyruvate dioxygenase
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials